BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C04SP1|AL428515
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1698 1647 0.0
>3x_Contig1698
Length = 21001
Score = 1647 bits (826), Expect = 0.0
Identities = 852/864 (98%), Gaps = 2/864 (0%)
Strand = Plus / Minus
Query: 1 catcanaggtctgtttcaaatagtgttttacaataccctcattgaagaaatagaaacaac 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8827 catcataggtctgtttcaaatagtgttttacaataccctcattgaagaaatagaaacaac 8768
Query: 61 catcattataagtgatgaaagtatcaatgagaagcattgcatatgaataagagggtaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8767 catcattataagtgatgaaagtatcaatgagaagcattgcatatgaataagagggtaaag 8708
Query: 121 tgaagttgacacttatatcattattcccatcatttttagctagcacgattctgtacgcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8707 tgaagttgacacttatatcattattcccatcatttttagctagcacgattctgtacgcgt 8648
Query: 181 taccttcttcttggagcacttcatcgactggttctggttcattcaacaaagagggattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8647 taccttcttcttggagcacttcatcgactggttctggttcattcaacaaagagggattgg 8588
Query: 241 ccaacgatgctgaagaagacgaagtaggtaaatgtgatgctcctgttggcttccgaag-c 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8587 ccaacgatgctgaagaagacgaagtaggtaaatgtgatgctcctgttggcttccgaaggc 8528
Query: 300 gtttatgattcthcctatccaaatgtgctcttttccttctcaacgaatcagggatcaagg 359
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8527 gtttatgattcttcctatccaaatgtgctcttttccttctcaacgaatcagggatcaagg 8468
Query: 360 aaagaatctccataccaaacaatgtcattgacgatgatccaacgamatahhcttgacctg 419
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 8467 aaagaatctccataccaaacaatgtcattgacgatgatccaacgaaatattcttgacctg 8408
Query: 420 tccttgattccaccaaacggcctctcctctctgagaaattgggcacgatttcatcatcat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8407 tccttgattccaccaaacggcctctcctctctgagaaattgggcacgatttcatcatcat 8348
Query: 480 gaaccaaatcatggacactgttcttttgaraaaccacatccgtatcgggtttatkcatca 539
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 8347 gaaccaaatcatggacactgttcttttgaaaaaccacatccgtatcgggtttattcatca 8288
Query: 540 ctggtaaagtccttgtatcctgatttggctggaaacttgaactactagtagtatcagcat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8287 ctggtaaagtccttgtatcctgatttggctggaaacttgaactactagtagtatcagcat 8228
Query: 600 ggagataagtcttactacgtgatcgcnattcgtcgtactgttgtttcaattgctctaggg 659
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8227 ggagataagtcttactacgtgatcgcaattcgtcgtactgttgtttcaattgctctaggg 8168
Query: 660 actggacctttgcgttacgttccgtgagcgaagattgcwacttaacgttttccttcttca 719
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 8167 actggacctttgcgttacgttccgtgagcgaagattgcaacttaacgttttccttcttca 8108
Query: 720 tcatactcaaatcgttctgcaaccgctgcaaataactcatagamacgattagtttcttat 779
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 8107 tcatactcaaatcgttctgcaaccgctgcaaataactcatagaaacgattagtttcttat 8048
Query: 780 tggggttccacgtactcgcaagcaacacccgccttgagacatttggaacatggattccca 839
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8047 t-gggttccacgtactcgcaagcaacacccgccttgagacatttggaacatggattccca 7989
Query: 840 cccggacacttaatatgtctacgt 863
||||||||||||||||||||||||
Sbjct: 7988 cccggacacttaatatgtctacgt 7965
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6236
Number of Sequences: 1807
Number of extensions: 6236
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)